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研究员
邓书林 研究员/PI/博导
职务： 植物与微生物互作研究方向负责人
电话： 020-37092025
地址： 广东省广州市天河区兴科路723号
学历/学位： 博士
电子邮件： sldeng@scbg.ac.cn
邮政编码： 510650
学习及工作简历
1998.09—2002.06  集美大学水产学院 本科学习
2002.07—2002.12  泉州激成水族有限公司 技术员
2003.03—2003.08  广州中医药大学热带医学研究所 研究助理
2003.09—2010.12  中山大学生命科学学院 研究生（硕士+博士）
2008.09—2010.12  美国洛克菲勒大学 访问学生
2011.02—2016.01  美国洛克菲勒大学 博士后
2016.02—2018.01  新加坡淡马锡生命科学研究所 博士后
2017.09—   -           中国科学院华南植物园 研究员
研究领域： 
        植物几乎分布于地球陆表各个角落，对于生境具有极大的适应性。由于固着生活，植物一生经常遭受各种生物与非生物胁迫。解析植物对极端环境的适应机制及其应对胁迫的信号转导机理，将为全球气候变化背景下环境高适作物培育提供理论指导及基因资源。研究组主要从事以下三个方向研究：
        1、植物与微生物的互作，重点关注植物与病毒互作的分子机制，一方面为抗病毒作物培育提供理论指导与基因资源；另一方面通过挖掘病毒基因组中的功能性元件，开发生物技术工具。
        2、植物对盐碱及酸铝环境适应的分子机制，主要以天然分布于滨海高盐生境的红树和酸铝贫瘠土壤的桃金娘为对象，阐明其生境适应的分子机制，挖掘植物抗逆基因资源，培育高抗作物新种质，从而提升盐碱及酸铝贫瘠等边际土壤的利用效率。
        3、经济作物品质性状的遗传基础解析及改良。
承担科研项目情况：
1）组蛋白修饰因子调控植物病毒感染的分子机理，国家自然科学基金面上项目，2019.01—2022.12
2）日中性植物番茄CONSTANS类似蛋白的分子功能研究，国家自然科学基金面上项目，2021.01—2024.12
3）高玉米黄质万寿菊新品系开发，地方科技攻关项目，2021.04—2023.03
社会任职：
获奖及荣誉：
1）2017中国科学院华南植物园“BRJH”研究员
2）2019年广东省“珠江人才计划”青年拔尖人才
2）赣南师范大学兼职教授（2019— ）
代表论著：
说明: #, 共同贡献; *, 通讯作者

1.        Liu, S., Lyu, S., Zhang, Y., Liu, S. and Deng, S. (2025) Tomato CONSTANS-Like1 promotes anthocyanin biosynthesis under short day and suboptimal low temperature. Plant physiology, 198, kiaf190.

2.        Yang, H., Zhang, Y., Lyu, S., Mao, Y., Yu, F., Liu, S., Fang, Y. and Deng, S. (2025) Arabidopsis CIRP1 E3 ligase modulates drought and oxidative stress tolerance and reactive oxygen species homeostasis by directly degrading catalases. Journal of integrative plant biology, 67, 1274-1289.

3.        Zhang, Y., Xian, Y., Yang, H., Yang, X., Yu, T., Liu, S., Liang, M., Jiang, X. and Deng, S. (2025) A novel geminivirus-derived 3′ flanking sequence of terminator mediates the gene expression enhancement. Plant biotechnology journal, 23, 1053-1066.

4.        Yang, L., Wang, G., Liu, T. and Deng, S. (2025) The MYB transcription factor RtAN2 promotes anthocyanin accumulation over proanthocyanidin during the fruit ripening of rose myrtle berries. Industrial Crops and Products, 224, 120433.

5.        Li, H.-G., Yang, L., Fang, Y., Wang, G., Lyu, S. and Deng, S. (2025) A genome-wide-level insight into the HSF gene family of Rhodomyrtus tomentosa and the functional divergence of RtHSFA2a and RtHSFA2b in thermal adaptation. Plant Physiology and Biochemistry, 220, 109460.

6.        Lyu, S., Fang, Y., Zhang, Y., Liu, Z. and Deng, S. (2024) Nickel phytoremediation potential of Plantago major L.: Transcriptome analysis. Environmental and Experimental Botany, 228, 106020.

7.        Lyu, S., Mao, Y., Zhang, Y., Yu, T., Yang, X., Zhu, H. and Deng, S. (2024) Genome-wide identification of sweet potato U-Box E3 ubiquitin ligases and roles of in negative regulation of drought stress. Physiologia Plantarum, 176, e14568.

8.        Yang, H., Zhang, Y., Lyu, S., Liu, Y., Jian, S. and Deng, S. (2024) MpNAC1, a transcription factor from the mangrove associate Millettia pinnata, confers salt and drought stress tolerance in transgenic Arabidopsis and rice. Plant Physiology and Biochemistry, 211, 108721.

9.        Yang, L., Jin, J., Lyu, S., Zhang, F., Cao, P., Qin, Q., Zhang, G., Feng, C., Lu, P., Li, H. and Deng, S. (2024) Genomic analysis based on chromosome-level genome assembly reveals Myrtaceae evolution and terpene biosynthesis of rose myrtle. BMC Genomics, 25, 578.

10.    Zhang, Y., Yang, H., Liu, Y., Hou, Q., Jian, S. and Deng, S. (2024) Molecular cloning and characterization of a salt overly sensitive3 (SOS3) gene from the halophyte Pongamia. Plant Molecular Biology, 114, 57.

11.    Zhang, Y., Yang, X., Huang, L. and Deng, S. (2024) A highly efficient Agrobacterium-mediated infectious system for Sweet potato leaf curl virus and a deltasatellite-based VIGS vector. Phytopathology Research, 6, 23.

12.    Zhao, L., Yao, L., Liu, M., Qiu, S., He, J., Lin, J., Tao, Z., Lu, Y., Deng, S., Chen, H. and Qiu, S.-X. (2024) Longistylin A from Cajanus cajan (L.) Millsp. disturbs glycerophospholipid metabolism and cytokinin biosynthesis of Nocardia seriolae. Journal of Ethnopharmacology, 330, 118199.

13.    Huang, G., Wu, W., Chen, Y., Zhi, X., Zou, P., Ning, Z., Fan, Q., Liu, Y., Deng, S., Zeng, K. and Zhou, R. (2023) Balancing selection on an MYB transcription factor maintains the twig trichome color variation in Melastoma normale. BMC Biology, 21, 122.

14.    Lyu, S., Mei, Q., Liu, H., Wang, B., Wang, J., Lambers, H., Wang, Z., Dong, B., Liu, Z. and Deng, S. (2023) Genome assembly of the pioneer species Plantago major L. (Plantaginaceae) provides insight into its global distribution and adaptation to metal-contaminated soil. DNA Research, 30, dsad013.

15.    Yang, H., Zhang, Y., Liu, Y., Jian, S. and Deng, S. (2023) A novel ABA-induced transcript factor from Millettia pinnata, MpAITR1, enhances salt and drought tolerance through ABA signaling in transgenic Arabidopsis. Journal of Plant Physiology, 288, 154060.

16.    Yang, L., Wu, K., Qiu, S., Cao, H. and Deng, S. (2023) A plant regeneration protocol from callus cultures of medicinal plant Rhodomyrtus tomentosa. Plant Cell, Tissue and Organ Culture, 153, 307-317.

17.    Zhang, Y., Lyu, S., Hu, Z., Yang, X., Zhu, H. and Deng, S. (2023) Identification and functional characterization of the SUMO system in sweet potato under salt and drought stress. Plant Science, 330, 111645.

18.    Xu, G., Guo, W., Li, Z., Wang, C., Xu, Y., Jin, J., Zhou, H. and Deng, S. (2022) Transcriptomic insights into the regulatory networks of chilling-induced early flower in tobacco (Nicotiana tabacum L.). Journal of Plant Interactions, 17, 496-506.

19.    Yu, Z., Lu, X., Choi, J., Deng, S., Xiong, B., Zhang, W., Wang, H., Wang, S. and Tan, H. (2022) 2-Pyrones from endophytic fungus Diaporthe foeniculina BZM-15. Natural Product Research, 36, 4853-4861.

20.    Yu, Z., Li, W., Zhang, S., Zhong, B., Wang, J., Lee, S.-Y., Choi, J. and Deng, S. (2022) Mapping the Mangrove Forest Restoration Potential and Conservation Gaps in China Based on Random Forest Model. Journal of People, Plants, and Environment, 25, 425-446.

21.    Wang, Y., Huang, C., Zeng, W., Zhang, T., Zhong, C., Deng, S. and Tang, T. (2021) Epigenetic and transcriptional responses underlying mangrove adaptation to UV-B. iScience, 24, 103148.

22.    Yu, Z., Yan, H.-Z., Liang, L., Zhang, Y., Yang, H., Li, W., Choi, J., Huang, J. and Deng, S. (2021) A C2H2-Type Zinc-Finger Protein from Millettia pinnata, MpZFP1, Enhances Salt Tolerance in Transgenic Arabidopsis. International journal of molecular sciences, 22, 10832.

23.    Zhang, Y., Huang, J., Hou, Q., Liu, Y., Wang, J. and Deng, S. (2021) Isolation and Functional Characterization of a Salt-Responsive Calmodulin-Like Gene MpCML40 from Semi-Mangrove Millettia pinnata. International journal of molecular sciences, 22, 3475.

24.    Li, S., Lyu, S., Liu, Y., Luo, M., Shi, S. and Deng, S. (2021) Cauliflower mosaic virus P6 dysfunctions histone deacetylase HD2C to promote virus infection. Cells, 10, 2278.

25.    Wu, H.-W., Deng, S., Xu, H., Mao, H.-Z., Liu, J., Niu, Q.-W., Wang, H. and Chua, N.-H. (2018). A noncoding RNA transcribed from the AGAMOUS (AG) second intron binds to CURLY LEAF and represses AG expression in leaves. New Phytologist, 219(4), 1480-1491.

26.    Cao, K., Cui, L., Zhou, X., Ye, L., Zou, Z. and Deng, S. (2016) Four Tomato FLOWERING LOCUS T-Like Proteins Act Antagonistically to Regulate Floral Initiation. Frontiers in Plant Science, 6, 1213.

27.    Deng, S., Jang, I.-C., Su, L., Xu, J. and Chua, N.-H. (2016) JMJ24 targets CHROMOMETHYLASE3 for proteasomal degradation in Arabidopsis. Genes & Development, 30, 251-256.

28.    Liu, J., Deng, S., Wang, H., Ye, J., Wu, H.-W., Sun, H.-X. and Chua, N.-H. (2016) CURLY LEAF Regulates Gene Sets Coordinating Seed Size and Lipid Biosynthesis. Plant physiology, 171, 424-436.

29.    Deng, S. and Chua, N.-H. (2015) Inverted-Repeat RNAs Targeting FT Intronic Regions Promote FT Expression in Arabidopsis. Plant and Cell Physiology, 56, 1667-1678.

30.    Deng, S., Xu, J., Liu, J., Kim, S.-H., Shi, S. and Chua, N.-H. (2015) JMJ24 binds to RDR2 and is required for the basal level transcription of silenced loci in Arabidopsis. The Plant Journal, 83, 770-782.

31.    Jung, C., Zhao, P., Seo, J.S., Mitsuda, N., Deng, S. and Chua, N.-H. (2015) PLANT U-BOX PROTEIN10 Regulates MYC2 Stability in Arabidopsis. The Plant Cell, 27, 2016-2031.

32.    Deng, S., Dai, H., Arenas, C., Wang, H., Niu, Q.-W., and Chua, N.-H. (2014) Transcriptional silencing of Arabidopsis endogenes by single-stranded RNAs targeting the promoter region. Plant & cell physiology, 55, 823-833.

33.    Liu, J., Jung, C., Xu, J., Wang, H., Deng, S., Bernad, L., Arenas-Huertero, C. and Chua, N.H. (2012) Genome-Wide Analysis Uncovers Regulation of Long Intergenic Noncoding RNAs in Arabidopsis. Plant Cell, 24, 4333 - 4345.

34.    Jang, I.-C., Niu, Q.-W., Deng, S., Zhao, P. and Chua, N.-H. (2012) Enhancing protein stability with retained biological function in transgenic plants. The Plant Journal, 72, 345-354.

35.    Liang, S., Fang, L., Zhou, R., Tang, T., Deng, S., Dong, S., Huang, Y., Zhong, C. and Shi, S. (2012) Transcriptional homeostasis of a mangrove species, Ceriops tagal, in saline environments, as revealed by microarray analysis. PloS one, 7, e36499.

36.    Deng, S., Huang, Y., He, H., Tan, F., Ni, X., Jayatissa, L.P., Hettiarachi, S. and Shi, S. (2009) Genetic diversity of Aegiceras corniculatum (Myrsinaceae) revealed by amplified fragment length polymorphism (AFLP). Aquatic Botany, 90, 275-281.

37.    Huang, Y., Tan, F., Su, G., Deng, S., He, H. and Shi, S. (2008) Population genetic structure of three tree species in the mangrove genus Ceriops (Rhizophoraceae) from the Indo West Pacific. Genetica, 133, 47-56.

38.    Fu, X., Huang, Y., Deng, S., Zhou, R., Yang, G., Ni, X., Li, W. and Shi, S. (2005) Construction of a SSH library of Aegiceras corniculatum under salt stress and expression analysis of four transcripts. Plant Science, 169, 147-154.

39.    Fu, X., Deng, S., Su, G., Zeng, Q. and Shi, S. (2004) Isolating high-quality RNA from mangroves without liquid nitrogen. Plant Molecular Biology Reporter, 22, 197-197.